GENIUS II: a high-throughput database system for linking ORFs in complete genomes to known protein three-dimensional structures

نویسندگان

  • Yukimitsu Yabuki
  • Yuri Mukai
  • Mark B. Swindells
  • Makiko Suwa
چکیده

GENIUS II is an automated database system in which open reading frames (ORFs) in complete genomes are assigned to known protein three-dimensional (3D) structures. The system uses the multiple intermediate sequence search method in which query and target sequences are linked by intermediate sequences gathered by PSI-BLAST search. By applying the system to 129 complete genomes, 43.8% on average of the ORFs in the genomes were assigned to known 3D structures and the results are available for free at GENIUS II web site.

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عنوان ژورنال:
  • Bioinformatics

دوره 20 4  شماره 

صفحات  -

تاریخ انتشار 2004